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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs7204288 chr16:24784531 A/G SLC5A11 chr16:24857162-24922949:+ 1.05 5.48 1.24E-6 Box Plot
ACC rs7206852 chr16:50395168 T/A CYLD chr16:50775961-50835846:+ 0.59 5.43 1.52E-6 Box Plot
ACC rs7222009 chr17:18289923 A/G LOC220594 chr17:18414577-18445234:- 0.67 6.35 5.33E-8 Box Plot
ACC rs72255857 chr5:96291796 CTGTTTAAA/C ERAP2 chr5:96211643-96255420:+ 0.82 8.52 1.97E-11 Box Plot
ACC rs72312569 chr20:44370284 CTAAATAAA/C WFDC3 chr20:44376583-44420571:- 0.87 6.45 3.77E-8 Box Plot
ACC rs723902 chr19:42084182 G/C CEACAM21 chr19:42055886-42093197:+ 0.71 5.41 1.63E-6 Box Plot
ACC rs7249294 chr19:16121580 A/G C19orf44 chr19:16607122-16632163:+ 0.73 5.13 4.29E-6 Box Plot
ACC rs7251745 chr19:36717111 C/G ZFP14 chr19:36825355-36870101:- 0.54 5.24 2.99E-6 Box Plot
ACC rs7252758 chr19:16120013 C/T C19orf44 chr19:16607122-16632163:+ 0.73 5.13 4.29E-6 Box Plot
ACC rs725460 chr11:74697923 G/T XRRA1 chr11:74518784-74660245:- 0.69 5.6 8.29E-7 Box Plot
ACC rs72608588 chr7:72217100 T/C TYW1B chr7:72023729-72298777:- 1.24 8.3 4.23E-11 Box Plot
ACC rs7261260 chr20:18014554 C/T DSTN chr20:17550508-17590564:+ 1.24 6.21 8.85E-8 Box Plot
ACC rs7261668 chr20:44364602 T/C WFDC3 chr20:44376583-44420571:- 0.86 6.08 1.46E-7 Box Plot
ACC rs7263437 chr20:44410887 C/T WFDC3 chr20:44376583-44420571:- 0.86 5.63 7.39E-7 Box Plot
ACC rs72756041 chr1:235321364 T/G RBM34 chr1:235294498-235324772:- 0.65 5.92 2.57E-7 Box Plot